Logo
  • Home
  • Submit a request
Sign in
  • Home
  • Submit a request
sidebar image

Scientific Computing

This section provides information about the programming environments on the NeSI HPCs, explains how to find installed applications, describes how to compile and link your own software applications and provides access to manuals, user guides and training resources

Training

  • Webinars

Interactive computing using Jupyter

  • Jupyter on NeSI
  • RStudio via Jupyter on NeSI
  • MATLAB via Jupyter on NeSI
  • Virtual Desktop via Jupyter on NeSI
  • Jupyter kernels - Tool-assisted management
  • Jupyter kernels - Manual management

The NeSI High Performance Computers

  • Overview
  • Mahuika
  • Māui
  • Māui Ancillary
  • Available GPUs on NeSI

Supported Applications

  • ABAQUS
  • AlphaFold
  • ANSYS
  • BLAST
  • BRAKER
  • CESM
See all 44 articles

Running Jobs on Māui and Mahuika

  • GPU use on NeSI
  • Job Checkpointing
  • Slurm Interactive Sessions
  • Fair Share
  • Job prioritisation
  • Mahuika Slurm Partitions
See all 12 articles

Profiling and Debugging

  • Profiler: VTune
  • Slurm Native Profiling
  • Profiler: ARM MAP
  • Debugging

HPC Software Environment

  • Per job temporary directories
  • Build an Apptainer container on a Milan compute node
  • OpenMP settings
  • Offloading to GPU with OpenMP
  • Offloading to GPU with OpenACC
  • NVIDIA GPU Containers
See all 16 articles

Terminal Setup

  • Standard Terminal Setup
  • Ubuntu LTS terminal (Windows 10)
  • MobaXterm Setup (Windows)
  • WinSCP/PuTTY Setup (Windows)
  • X11 on NeSI
  • Windows Subsystem for Linux (WSL)

Manuals and User Guides

  • Troubleshooting on NeSI
  • Manuals
  • XC50 Aries Network Architecture
Services
  • High Performance Computing
  • Consultancy
  • Data services
  • Training
Team
  • Our Team
About NeSI
  • Background
  • Vacancies
  • Contact Us
Community
  • Events
  • News
  • Case Studies
  • eResearch 2020
Copyright © 2020 · New Zealand eScience Infrastructure | Disclaimer | Privacy